lcms_meta_export: Export metadata

In sipss/NIHSlcms: Signal processing of LC-MS metabolomics

Description

Export Metadata to an Excel file.

Usage

lcms_meta_export(dataset, xlsx_file)

Arguments

dataset	A lcms_dataset.
xlsx_file	The .xlsx excel file.

Value

The Excel file name.

See Also

Other metadata functions: lcms_meta_add(), lcms_meta_read(), phData()

Other dataset functions: IPO_group_peaks(), find_peaks_cwp(), lcms_dataset_load(), lcms_dataset_save(), lcms_fill_chrom_peaks(), lcms_filter_mz(), lcms_filter_polarity(), lcms_filter_rt_min(), lcms_filter_sample_type(), lcms_meta_add(), lcms_plot_chrom_peak_image(), lcms_plot_tics(), lcms_rearrange_datafiles_by_class(), lcms_retention_time_alignment_plot(), lcms_tics(), obiAdjust_Rtime(), peakpicking_optimization(), phData()

Other import/export functions: lcms_convert_ipo_to_xcms(), lcms_dataset_load(), lcms_dataset_save(), lcms_identify_metabolites(), lcms_meta_read(), lcms_peak_annotation(), lcms_raw_data(), lcms_read_ipo_to_xcms(), lcms_read_samples(), lcms_rearrange_datafiles_by_class(), lcms_sig_peaks_table(), lcms_spectral_sig_features(), lcms_to_mait(), lcms_write_opt_params(), lcms_write_parameter_table(), phData()

Examples

## Not run: 
dataset_metadata <- lcms_dataset_load(system.file("extdata",
                                             "dataset_metadata.rds",
                                              package = "AlpsLCMS"))
xlsx_file <- paste0(system.file("extdata",package = "AlpsLCMS"),
                    "/", "exported_metadata.xlsx")

lcms_meta_export(dataset_metadata, xlsx_file)
print(dataset_metadata)

## End(Not run)

sipss/NIHSlcms documentation built on May 13, 2021, 6:19 p.m.