centEpiFibIC.m: Reference for genenric epithelial tissue

centEpiFibIC.mR Documentation

Reference for genenric epithelial tissue

Description

This reference could be used to estimate pproportions of epithelial cells, fibroblasts, and total immune cells in epithelial tissues.

Usage

data(centEpiFibIC.m)

Format

A matrix with 716 rows and 3 columns

Details

  • Epi

  • Fib

  • IC

References

Zheng SC, Webster AP, Dong D, Feber A, Graham DG, Sullivan R, Jevons S, Lovat LB, Beck S, Widschwendter M, Teschendorff AE A novel cell-type deconvolution algorithm reveals substantial contamination by immune cells in saliva, buccal and cervix. Epigenomics (2018) 10: 925-940. doi: 10.2217/epi-2018-0037.


sjczheng/EpiDISH documentation built on Nov. 13, 2022, 9:57 p.m.