R/cent12CT.R

In sjczheng/EpiDISH: Epigenetic Dissection of Intra-Sample-Heterogeneity

#' Whole blood reference of 12 blood cell subtypes for EPIC array
#'
#' This reference is constructed using data from Salas et al.(2022). It contains
#'  the following 12 blood cell subtypes. This reference is constructed for EPIC arrays.
#'  See \code{cent12CT450k.m} for 450k arrays.
#'
#' \itemize{
#'   \item CD4+ naive T-cells
#'   \item Basophil cells
#'   \item CD4+ memory T-cells
#'   \item Memory B-cells
#'   \item Naive B-cells
#'   \item Regulatory T-Cells
#'   \item CD8+ memory T-cells
#'   \item CD8+ naive T-cells
#'   \item Eosinophils
#'   \item NK-cells
#'   \item Neutrophils 
#'   \item Monocytes
#' }
#'
#' @docType data
#' @keywords datasets
#' @name cent12CT.m
#' @usage data(cent12CT.m)
#' @format A matrix with 600 rows and 12 columns
#' @references 
#' Lucas A Salas, Ze Zhang, Devin C Koestler, Rondi A Butler, Helen M Hansen,
#'  Annette M Molinaro, John K Wiencke, Karl T Kelsey, Brock C Christensen
#' \emph{Enhanced cell deconvolution of peripheral blood using DNA methylation for high-resolution immune profiling.}
#' Nat Commun. (2022) 13: 761.
#' doi:\href{https://doi.org/10.1038/s41467-021-27864-7}{
#' 10.1038/s41467-021-27864-7}.
#' 
#' 
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