annotateMarkers: Annotate cluster markers computed by Seurat
In sjessa/cytokit: A toolkit for analyzing single cell RNA-seq data
Description
Usage
Arguments
Author(s)
Examples
Description
Annotate cluster markers computed by Seurat
Usage
1
annotateMarkers(markers, species = "mm")
Arguments
markers
A dataframe containing cluster markers as computed by
FindAllMarkers. Rownames should be gene symbols.
species
String specifying the species, one of "mm" or "hg", used to determine the
annotation. Default: "mm".
Author(s)
Selin Jessa
Examples
1
annotateMarkers(markers_pbmc, "hg")
sjessa/cytokit documentation built on Feb. 10, 2020, 7:58 a.m.
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Description Usage Arguments Author(s) Examples
Description
Annotate cluster markers computed by Seurat
Usage
1 | annotateMarkers(markers, species = "mm")
|
Arguments
markers |
A dataframe containing cluster markers as computed by FindAllMarkers. Rownames should be gene symbols. |
species |
String specifying the species, one of "mm" or "hg", used to determine the annotation. Default: "mm". |
Author(s)
Selin Jessa
Examples
1 | annotateMarkers(markers_pbmc, "hg")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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