tsne_plot_clusters_highlighted: Draws a tSNE plot highlighting the selected clusters.
In sjessa/cytokit: A toolkit for analyzing single cell RNA-seq data

Draws a tSNE plot highlighting the selected clusters.

1	tsne_plot_clusters_highlighted(seurat, selected_clusters, legend = TRUE)

`seurat`	Seurat object to convert to a Monocle (CellDataSet) object.
`selected_clusters`	Selected clusters in Seurat object. Full names of clusters must be given.
`legend.`	Boolean. Display legend or not.

A ggplot2 object.

Alexis Blanchet-Cohen

sjessa/cytokit documentation built on Feb. 10, 2020, 7:58 a.m.

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