seurat_to_monocle: Converts a Seurat object to a Monocle object.
In sjessa/cytokit: A toolkit for analyzing single cell RNA-seq data
Description
Usage
Arguments
Value
Author(s)
Description
Full name of selected clusters must be given.
In your script, you must load the monocle library, before calling this function.
Usage
1
seurat_to_monocle(seurat, selected_clusters)
Arguments
seurat
Seurat object to convert to a Monocle (CellDataSet) object.
selected_clusters
Selected clusters in Seurat object. Full names of clusters must be given.
Value
A CellDataSet object
Author(s)
Alexis Blanchet-Cohen
sjessa/cytokit documentation built on Feb. 10, 2020, 7:58 a.m.
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Description Usage Arguments Value Author(s)
Description
Full name of selected clusters must be given. In your script, you must load the monocle library, before calling this function.
Usage
1 | seurat_to_monocle(seurat, selected_clusters)
|
Arguments
seurat |
Seurat object to convert to a Monocle (CellDataSet) object. |
selected_clusters |
Selected clusters in Seurat object. Full names of clusters must be given. |
Value
A CellDataSet object
Author(s)
Alexis Blanchet-Cohen
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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