table_to_species_data | R Documentation |
prepares table of observational records into a sites x
species matrix for use in ecomix
.
table_to_species_data(
observation_data,
site_id = "site_id",
species_id = "species_id",
measurement_id = NULL
)
make_mixture_data(species_data, covariate_data)
observation_data |
data to be imported into R. A table of species occurrences and site records. |
site_id |
Name of column that contains site names /IDs. |
species_id |
Name of column that contains species information/ID. |
measurement_id |
Name of column that contains species observational data. eg, 'occurrence', 'abundance' or 'biomass'. |
species_data |
A character string providing the name of the column in |
covariate_data |
A character string providing the name of the column in |
A sites x species matrix to used as species_data in ecomix
models.
A list containing the following elements:
species_data |
A matrix of occurrence, counts, biomass, or... |
covariate_data |
The design matrix for the global covariates |
Skipton Woolley
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