slzhao/RnaSeqSampleSize: RnaSeqSampleSize

RnaSeqSampleSize package provides a sample size calculation method based on negative binomial model and the exact test for assessing differential expression analysis of RNA-seq data. It controls FDR for multiple testing and utilizes the average read count and dispersion distributions from real data to estimate a more reliable sample size. It is also equipped with several unique features, including estimation for interested genes or pathway, power curve visualization, and parameter optimization.

Getting started

Package details

Bioconductor views DifferentialExpression ExperimentalDesign GeneExpression ImmunoOncology RNASeq Sequencing
LicenseGPL (>= 2)
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
slzhao/RnaSeqSampleSize documentation built on March 24, 2022, 2:21 a.m.