Generate named list of EL4P parameters, and calculates lambda (see calcLambda_MicroEL4P
for details).
1 2 3 | EL4P.Parameters(nAqua, nHumans, R0, eqAqua, EIP, lifespan, G, nu, S,
alpha_a = 0.8, alpha_sd = 0.004, p = 0.9, K_a = 1, K_b = 1,
b = 0.55, c = 0.15, r = 1/38)
|
nAqua |
number of aquatic habitats on landscape |
nHumans |
number of humans on landscape |
R0 |
desired pathogen transmission level at equilibrium |
eqAqua |
vector of probability of oviposition at each aquatic habitat |
EIP |
length of the entomological incubation period |
lifespan |
average lifespan of mosquito |
G |
mean total lifetime egg production of adult female |
nu |
mean egg batch size for single oviposition |
S |
stability index; number of bites on humans over the average mosquito lifespan |
alpha_a |
density independent survival parameter -log(alpha_a^{\frac{1-p}{5}}) |
alpha_sd |
standard deviation of density independent survival parameter |
p |
expected fraction of cohort that advances to next life stage (1/p is expected time spent in each stage L1,L2,L3,L4,P) |
K_a |
shape parameter for gamma distributed weights on K |
K_b |
scale parameter for gamma distributed weights on K |
b |
mosquito to human transmission efficiency |
c |
human to mosquito transmission efficiency |
r |
rate of recovery in humans (1/average length of infection) |
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