API for smitdave/MASH
MASH (Modular Analysis and Simulation for Human Health)

Global functions
AquaEmergeLambdaPlot_utility Man page
AquaticSite Man page
EL4P Man page
EL4P.Landscape.Fit Man page
EL4P.Mesh.Fit Man page
EL4P.Parameters Man page
EggQ Man page
FeedingSite Man page
HistoryGeneric Man page
HistoryTravel Man page
Human Man page
HumanEventQ Man page
HumanPop Man page
HumanPop.Parameters Man page
HumanPop_get_PfMOI_PAR Man page
HumanPop_get_PfMOI_history Man page
HumanPop_get_PfSI_PAR Man page
HumanPop_get_PfSI_history Man page
HumanPop_set_PfMOI_PAR Man page
HumanPop_set_PfSI_PAR Man page
HumanPop_set_humanPfMOI Man page
HumanPop_set_humanPfSI Man page
Human_get_PfMOI_PAR Man page
Human_get_PfSI_PAR Man page
Human_set_humanPfMOI Man page
Human_set_humanPfSI Man page
ImagoQ Man page
K2psi_MicroEL4P Man page
Landscape Man page
Landscape.Aqua.Parameters Man page
Landscape.Feeding.Parameters Man page
Landscape.Parameters Man page
MACRO.Humans.Setup Man page
MACRO.MosquitoPop.Parameters Man page
MACRO.Patch.Emerge.Setup Man page
MACRO.Patch.Parameters Man page
MACRO.Tile.Parameters Man page
MASH Man page
MASH-package Man page
MBITES.BRO.Cohort.Setup Man page
MBITES.BRO.Parameters Man page
MBITES.BRO.Setup Man page
MBITES.Cohort.Setup Man page
MBITES.FULL.Parameters Man page
MBITES.Generic.Setup Man page
MICRO.EL4P.Setup Man page
MICRO.Emerge.Setup Man page
MICRO.Humans.Setup Man page
MacroHumanPop_get_patchID Man page
MacroHumanPop_set_patchID Man page
MacroHuman_add2Q_Bites Man page
MacroHuman_add2Q_returnHome Man page
MacroHuman_add2Q_takeTrip Man page
MacroHuman_event_returnHome Man page
MacroHuman_event_takeTrip Man page
MacroHuman_expectedBites Man page
MacroHuman_get_MosquitoPointer Man page
MacroHuman_get_PatchesPointer Man page
MacroHuman_get_TilePointer Man page
MacroHuman_get_location Man page
MacroHuman_get_myEIR Man page
MacroHuman_get_patchID Man page
MacroHuman_get_travel Man page
MacroHuman_get_travelHistoryHuman Man page
MacroHuman_get_travelHistoryHumanPop Man page
MacroHuman_go_Patch Man page
MacroHuman_init_travel Man page
MacroHuman_json_travelHistory Man page
MacroHuman_queueInfectiousBites Man page
MacroHuman_returnHome Man page
MacroHuman_set_MosquitoPointer Man page
MacroHuman_set_PatchesPointer Man page
MacroHuman_set_TilePointer Man page
MacroHuman_set_location Man page
MacroHuman_set_myEIR Man page
MacroHuman_set_patchID Man page
MacroHuman_set_travel Man page
MacroHuman_sumKappa_PfMOI Man page
MacroHuman_sumKappa_PfSI Man page
MacroHuman_takeTrip Man page
MacroHuman_updateKappa Man page
MacroMosquitoPop Man page
MacroPatch Man page
MacroTile Man page
MicroKernelPlot_utility Man page
MicroKernel_DistanceMat Man page
MicroKernel_PowerKernel Man page
MicroKernel_SampleMvOb_MicroMosquitoPopFemale Man page
MicroKernel_exactAll Man page
MicroKernel_exactMvOb Man page
MicroKernel_moveMe_BRO Man page
MicroKernel_moveMe_BROM Man page
MicroKernel_moveMe_FULL Man page
MicroKernel_moveMe_Male Man page
MicroKernel_prSort Man page
MicroLandscapePlot_utility Man page
MicroMosquitoFemale Man page
MicroMosquitoMale Man page
MicroMosquitoPop.Setup Man page
MicroMosquitoPopFemale_clear_pop Man page
MicroMosquitoPopFemale_extend_pop Man page
MicroMosquitoPopFemale_push_pop Man page
MicroMosquitoPopFemale_update_nullPop Man page
MicroMosquitoPopFemale_update_pop Man page
MicroMosquitoPopFemale_which_alive Man page
MicroTile Man page
MosquitoFemaleHistory Man page
PfMOI.Parameters Man page
PfMOI.Setup Man page
PfMOI_increment_PfID Man page
PfMOI_ttClearPf_Independent Man page
PfMOI_ttClearPf_Interaction Man page
PfMOI_ttFeverPf Man page
PfMOI_ttGSWanePf Man page
PfMOI_ttInfectionPf Man page
PfMOI_ttPEWanePf Man page
PfMOI_ttSusceptiblePf Man page
PfMOI_ttTreatPf Man page
PfSI.Parameters Man page
PfSI.Setup Man page
PfSI_increment_PfID Man page
PfSI_ttClearPf Man page
PfSI_ttFeverPf Man page
PfSI_ttGSWanePf Man page
PfSI_ttInfectionPf Man page
PfSI_ttPEWanePf Man page
PfSI_ttSusceptiblePf Man page
PfSI_ttTreatPf Man page
RiskQ Man page
SEARCH.MicroKernel.Setup Man page
SimBitePfMOI Man page
SimBitePfMOI.Setup Man page
SimBitePfSI.Setup Man page
SimBite_MeanBites Man page
SimBite_WaitingTime Man page
add2Q_SimBitePfMOI Man page
add2Q_endPfMOI Man page
add2Q_endPfSI Man page
add2Q_endprophylaxisPfMOI Man page
add2Q_endprophylaxisPfSI Man page
add2Q_feverPfMOI Man page
add2Q_feverPfSI Man page
add2Q_gsvaccinatePfMOI Man page
add2Q_gsvaccinatePfSI Man page
add2Q_gswanePfMOI Man page
add2Q_gswanePfSI Man page
add2Q_infectHumanPfMOI Man page
add2Q_infectHumanPfSI Man page
add2Q_pevaccinatePfMOI Man page
add2Q_pevaccinatePfSI Man page
add2Q_pewanePfMOI Man page
add2Q_pewanePfSI Man page
add2Q_treatPfMOI Man page
add2Q_treatPfSI Man page
addCohort_MacroEmerge Man page
addCohort_MicroEL4P Man page
addCohort_MicroEL4PSite Man page
addCohort_MicroEmerge Man page
addCohort_MicroEmergeSite Man page
allocEggQ Man page
allocImagoQ Man page
betaRootA Man page
betaRootB Man page
calcLambda_MicroEL4P Man page
calculateBionomics_utility Man page
colLuminosity_utility Man page
emergingAdults_MacroEmerge Man page
endPfMOI Man page
endPfSI Man page
endprophylaxisPfMOI Man page
endprophylaxisPfSI Man page
event_SimBitePfMOI Man page
event_endPfMOI Man page
event_endPfSI Man page
event_endprophylaxisPfMOI Man page
event_endprophylaxisPfSI Man page
event_feverPfMOI Man page
event_feverPfSI Man page
event_gsvaccinatePfMOI Man page
event_gsvaccinatePfSI Man page
event_gswanePfMOI Man page
event_gswanePfSI Man page
event_infectHumanPfMOI Man page
event_infectHumanPfSI Man page
event_pevaccinatePfMOI Man page
event_pevaccinatePfSI Man page
event_pewanePfMOI Man page
event_pewanePfSI Man page
event_treatPfMOI Man page
event_treatPfSI Man page
extend_PatchesImagoQ Man page
feeding_PfMOI Man page
feeding_PfSI Man page
feverPfMOI Man page
feverPfSI Man page
gammaRates Man page
getEIP_MacroMosquitoPop Man page
get_MicroHumanPop_FemalePopPointer Man page
get_MicroHumanPop_LandscapePointer Man page
get_MicroHumanPop_TilePointer Man page
get_MicroHuman_ActivitySpace Man page
get_MicroHuman_FemalePopPointer Man page
get_MicroHuman_LandscapePointer Man page
get_MicroHuman_TilePointer Man page
get_MicroKernel_movement_BRO Man page
get_MicroKernel_movement_BROM Man page
get_MicroKernel_movement_FULL Man page
get_MicroKernel_movement_Male Man page
get_PatchesEggQ Man page
get_PatchesImagoQ Man page
get_lambda_MicroEmerge Man page
get_season Man page
ggColOffset_utility Man page
ggCol_utility Man page
gsvaccinatePfMOI Man page
gsvaccinatePfSI Man page
gswanePfMOI Man page
gswanePfSI Man page
humanPfMOI Man page
humanPfSI Man page
importMicroMosquitoHistory_utility Man page
infectHumanPfMOI Man page
infectHumanPfSI Man page
infectiousBite_PfMOI Man page
infectiousBite_PfSI Man page
init_MACRO_PfMOI Man page
init_MACRO_PfSI Man page
init_MICRO_PfMOI Man page
init_MICRO_PfSI Man page
init_MacroTile_PfMOI Man page
init_MacroTile_PfSI Man page
init_MicroHumanPop_ActivitySpace Man page
init_MicroHuman_ActivitySpace Man page
init_Pathogens_MicroMosquitoFemale_PfMOI Man page
init_Pathogens_MicroMosquitoFemale_PfSI Man page
init_Pathogens_MicroMosquitoPopFemale_PfMOI Man page
init_Pathogens_MicroMosquitoPopFemale_PfSI Man page
layEggs_MacroMosquitoPop Man page
lmTest_PfMOI Man page
lmTest_PfSI Man page
makeLambda_Macro Man page
makeLambda_MicroEmerge Man page
manage_PatchesImagoQ Man page
mbitesBRO_BloodMeal Man page
mbitesBRO_Pop_MBITES Man page
mbitesBRO_boutB Man page
mbitesBRO_boutO Man page
mbitesBRO_boutR Man page
mbitesBRO_cohort_humanEncounter Man page
mbitesBRO_cohort_oneMosquito_MBITES Man page
mbitesBRO_cohort_simCohort Man page
mbitesBRO_enterHouse Man page
mbitesBRO_get_MySiteType Man page
mbitesBRO_get_WTS Man page
mbitesBRO_get_restHaz Man page
mbitesBRO_get_surviveFlightProb Man page
mbitesBRO_humanEncounter Man page
mbitesBRO_landingSpot Man page
mbitesBRO_layEggs_EL4P Man page
mbitesBRO_layEggs_Emerge Man page
mbitesBRO_newSpot Man page
mbitesBRO_oneBout Man page
mbitesBRO_oneMosquito_MBITES Man page
mbitesBRO_timingExponential Man page
mbitesBRO_zooEncounter Man page
mbitesCohort_chooseHost Man page
mbitesGeneric_chooseHost Man page
mbitesGeneric_isActive Man page
mbitesGeneric_isAlive Man page
mbitesGeneric_pEnergySurvival Man page
mbitesGeneric_pOverFeed Man page
mbitesGeneric_pReFeed Man page
mbitesGeneric_pSenesce Man page
mbitesGeneric_pSugarBout Man page
mbitesGeneric_pTatter Man page
mbitesGeneric_rBatchSizeBms Man page
mbitesGeneric_rBatchSizeNorm Man page
mbitesGeneric_rBloodMealSize Man page
mbitesGeneric_rEggMaturationTimeNorm Man page
mbitesGeneric_rEggMaturationTimeOff Man page
mbitesGeneric_rTatterSize Man page
mbitesGeneric_surviveFlight Man page
mbitesGeneric_surviveResting Man page
meshK_MicroEL4P Man page
mosquitoPfMOI Man page
mosquitoPfSI Man page
newEgg Man page
newImago Man page
oneDay_MacroEmerge Man page
oneDay_RM Man page
oneStep_MicroEL4P Man page
oneStep_MicroEL4PSite Man page
oneStep_MicroEmerge Man page
oneStep_MicroEmergeSite Man page
ovipositionEq_oneHistory_utility Man page
ovipositionEq_utility Man page
pevaccinatePfMOI Man page
pevaccinatePfSI Man page
pewanePfMOI Man page
pewanePfSI Man page
plot_PfSI Man page
plot_PfSIOneTrajectory Man page
pointsClustered Man page
pointsLattice Man page
pointsOverdispersed Man page
pointsPoisson Man page
probeHost_PfMOI Man page
probeHost_PfSI Man page
probeHost_SimBitePfMOI Man page Man page
probing_PfMOI Man page
probing_PfSI Man page
psi2K_cf_MicroEL4P Man page
psi2K_plot_MicroEL4P Man page
psiFit_MicroEL4P Man page
queueBitesNegBinom_SimBitePfSI Man page
queueBites_SimBitePfMOI Man page
queueVaccination_SimBitePfMOI Man page
rdtTest_PfMOI Man page
rdtTest_PfSI Man page
run2eq_MicroEL4P Man page
sampleIx_utility Man page
set_FemalePop_MicroTile Man page
set_MicroHumanPop_FemalePopPointer Man page
set_MicroHumanPop_LandscapePointer Man page
set_MicroHumanPop_TilePointer Man page
set_MicroHuman_ActivitySpace Man page
set_MicroHuman_FemalePopPointer Man page
set_MicroHuman_LandscapePointer Man page
set_MicroHuman_TilePointer Man page
set_PatchesEggQ Man page
set_PatchesImagoQ Man page
set_lambda_MicroEmerge Man page
set_season Man page
simMICRO_oneStep Man page
simMacro Man page
sim_MicroHumanPop_ActivitySpace Man page
sim_MicroHuman_ActivitySpace Man page
siteAges Man page
sitePops Man page
treatPfMOI Man page
treatPfSI Man page
updateLandscape_MicroEL4P Man page
util_List2Df Man page
util_PfSIHistory Man page
util_PfSISlice Man page
util_PfSIoneHistory Man page
smitdave/MASH documentation built on May 30, 2019, 5:02 a.m.