MetShot will provides functions to schedule the high-throughput acquisition of targeted tandem mass spectrometry. Targets can be prioritized by biological relevance, e.g. determined by XCMS's diffreports, or user-provided priority lists. Supported target formats for instrument control are the PSI traML, Bruker micrOTOF control methods and Agilent something. After the measurements, MetShot uses CAMERA functions to create tandem mass peak list, to avoid background signals. Finally, MetShot can create batch query files for identification against MassBank or MetFrag.
|Author||Steffen Neumann <[email protected]>|
|Bioconductor views||Bioinformatics DataImport Infrastructure MassSpectrometry Metabolomics Proteomics|
|Maintainer||Steffen Neumann <[email protected]>, Andrea Thum <[email protected]>|
|License||GPL (>= 2)|
|Package repository||View on GitHub|
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