Estep: Internal function for EM algorithm E step
In songxiaoyu/iProFun: An integrative analysis tool to screen for Proteogenomic Functional traits perturbed by DNA alterations
Estep R Documentation
Internal function for EM algorithm E step
Description
Internal function for EM algorithm E step
Usage
Estep(cl, oldpi, n_trio, n_pattern, q, density_0, density_1)
Arguments
cl
Parallel computing
oldpi
Proportion of alteratives
n_trio
No. of trios
n_pattern
No. of association patterns (=2^J).
q
Association patterns
density_0
Density under null distribution
density_1
Density under alternative distribution
consider matrixStats::rowMins() or rpgm::rowMins()
songxiaoyu/iProFun documentation built on Dec. 8, 2022, 3:54 p.m.
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| Estep | R Documentation |
Internal function for EM algorithm E step
Description
Internal function for EM algorithm E step
Usage
Estep(cl, oldpi, n_trio, n_pattern, q, density_0, density_1)
Arguments
cl |
Parallel computing |
oldpi |
Proportion of alteratives |
n_trio |
No. of trios |
n_pattern |
No. of association patterns (=2^J). |
q |
Association patterns |
density_0 |
Density under null distribution |
density_1 |
Density under alternative distribution consider matrixStats::rowMins() or rpgm::rowMins() |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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