multi.omic.reg.summary: Reformat regression summaries

In songxiaoyu/iProFun: An integrative analysis tool to screen for Proteogenomic Functional traits perturbed by DNA alterations

Reformat regression summaries

Description

Reformat regression summaries from iProFun.reg as input of iProFun analysis for association probabilities and discoveries

Usage

multi.omic.reg.summary(reg.out.list)

Arguments

reg.out.list

reg.out.list is the regression summaries from iProFun.reg.

Value

list with the same length as xList. Nested within each list, it contains

betas_J:	Coefficient estimate for predictors across J outcome data types
betas_se_J:	Coefficent SE for predictors across J outcome data types
sigma2_J:	Regrssion error term for predictors across J outcome data types
dfs_J:	Regression degrees of freedom for predictors across J outcome data types
v_g_J:	(X^T X)^-1 projection on predictors across J outcome data types
xName_J:	Predictor name corresponds to each predictor-outcome pair across J outcome data types
yName_J:	Outcome name corresponds to each predictor-outcome pair across J outcome data types

songxiaoyu/iProFun documentation built on Dec. 8, 2022, 3:54 p.m.