iProFun.reg.table: Reformat the regression output into a table format. Each row...
In songxiaoyu/iProFun: An integrative analysis tool to screen for Proteogenomic Functional traits perturbed by DNA alterations
iProFun.reg.table R Documentation
Reformat the regression output into a table format. Each row is for a predictor-outcome pair.
Description
Reformat the regression output into a table format. Each row is for a predictor-outcome pair.
Usage
iProFun.reg.table(reg.all, xType = NULL, yType = NULL)
Arguments
reg.all
Output from iProFun.reg.
xType
A vector of string for the data types of xList, such as "mutation", "CNV" and "methylation".
yType
A vector of string for the data types of xList, such as "RNA", "protein" and "phospho".
Value
A table that includes gene ID, other gene info if provided, predictor data type, outcome data type,
estimate, se and p-value from Student's t-test, in a long format.
songxiaoyu/iProFun documentation built on Dec. 8, 2022, 3:54 p.m.
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| iProFun.reg.table | R Documentation |
Reformat the regression output into a table format. Each row is for a predictor-outcome pair.
Description
Reformat the regression output into a table format. Each row is for a predictor-outcome pair.
Usage
iProFun.reg.table(reg.all, xType = NULL, yType = NULL)
Arguments
reg.all |
Output from iProFun.reg. |
xType |
A vector of string for the data types of xList, such as "mutation", "CNV" and "methylation". |
yType |
A vector of string for the data types of xList, such as "RNA", "protein" and "phospho". |
Value
A table that includes gene ID, other gene info if provided, predictor data type, outcome data type, estimate, se and p-value from Student's t-test, in a long format.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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