| .allWaldStatGAMFC |
Source code
|
| .assignCells |
Source code
|
| .associationTest |
Source code
|
| .associationTest_conditions |
Source code
|
| .associationTest_conditions_original |
Source code
|
| .associationTest_original |
Source code
|
| .calculateDerivativeOneGene |
Source code
|
| .calculateDerivativesAllGenes |
Source code
|
| .checks |
Source code
|
| .clusterExpressionPatterns |
Source code
|
| .clusterExpressionPatterns_conditions |
Source code
|
| .conditionTest |
Source code
|
| .construct_contrast_matrix_conditions |
Source code
|
| .diffEndTest |
Source code
|
| .earlyDETest |
Source code
|
| .evaluateK |
Source code
|
| .findKnots |
Source code
|
| .find_conditions |
Source code
|
| .fitGAM |
Source code
|
| .getFoldChanges |
Source code
|
| .getModelReference |
Source code
|
| .getPredictCustomPointDf |
Source code
|
| .getPredictEndPointDf |
Source code
|
| .getPredictRangeDf |
Source code
|
| .getPredictStartPointDf |
Source code
|
| .get_offset |
Source code
|
| .patternDf |
Source code
|
| .patternDfPairwise |
Source code
|
| .plotGeneCount |
Source code
|
| .plotSmoothers |
Source code
|
| .plotSmoothers_conditions |
Source code
|
| .plotSmoothers_sce |
Source code
|
| .predictSmooth |
Source code
|
| .predictSmooth_conditions |
Source code
|
| .startVsEndTest |
Source code
|
| associationTest |
Man page
|
| associationTest,SingleCellExperiment-method |
Man page
|
| associationTest,list-method |
Man page
|
| cascade |
Man page
|
| cascade,SingleCellExperiment-method |
Man page
|
| celltype |
Man page
|
| clusterExpressionPatterns |
Man page
|
| clusterExpressionPatterns,SingleCellExperiment-method |
Man page
|
| clusterExpressionPatterns,list-method |
Man page
|
| conditionTest |
Man page
|
| conditionTest,SingleCellExperiment-method |
Man page
|
| countMatrix |
Man page
|
| crv |
Man page
|
| diffEndTest |
Man page
|
| diffEndTest,SingleCellExperiment-method |
Man page
|
| diffEndTest,list-method |
Man page
|
| earlyDETest |
Man page
|
| earlyDETest,SingleCellExperiment-method |
Man page
|
| earlyDETest,list-method |
Man page
|
| evaluateK |
Man page
|
| evaluateK,SingleCellExperiment-method |
Man page
|
| evaluateK,dgCMatrix-method |
Man page
|
| evaluateK,matrix-method |
Man page
|
| fitGAM |
Man page
|
| fitGAM,SingleCellExperiment-method |
Man page
|
| fitGAM,generalMatrix-method |
Man page
|
| fitGAM,matrix-method |
Man page
|
| gamList |
Man page
|
| getEigenStatGAM |
Source code
|
| getEigenStatGAMFC |
Source code
|
| getSmootherPvalues |
Man page
Source code
|
| getSmootherTestStats |
Man page
Source code
|
| nknots |
Man page
|
| nknots,SingleCellExperiment-method |
Man page
|
| nknots,list-method |
Man page
|
| patternTest |
Man page
|
| patternTest,SingleCellExperiment-method |
Man page
|
| patternTest,list-method |
Man page
|
| plotGeneCount |
Man page
|
| plotGeneCount,PseudotimeOrdering-method |
Man page
|
| plotGeneCount,SingleCellExperiment-method |
Man page
|
| plotGeneCount,SlingshotDataSet-method |
Man page
|
| plotSmoothers |
Man page
|
| plotSmoothers,SingleCellExperiment-method |
Man page
|
| plotSmoothers,gam-method |
Man page
|
| plot_evalutateK_results |
Man page
Source code
|
| predictCells |
Man page
|
| predictCells,SingleCellExperiment-method |
Man page
|
| predictCells,list-method |
Man page
|
| predictGAM |
Source code
|
| predictSmooth |
Man page
|
| predictSmooth,SingleCellExperiment-method |
Man page
|
| predictSmooth,list-method |
Man page
|
| sds |
Man page
|
| startVsEndTest |
Man page
|
| startVsEndTest,SingleCellExperiment-method |
Man page
|
| startVsEndTest,list-method |
Man page
|
| waldTestFC |
Source code
|
