getSmootherTestStats: Get smoother Chi-squared test statistics.
In statOmics/tradeSeq: trajectory-based differential expression analysis for sequencing data
View source: R/getSmootherTestStats.R
getSmootherTestStats R Documentation
Get smoother Chi-squared test statistics.
Description
Return test statistics from the mgcv package.
Usage
getSmootherTestStats(models)
Arguments
models
the GAM models, typically the output from fitGAM.
Note that this function only works when models is a list.
Value
a matrix with the wald statistics associated with each lineage's
smoother. The matrix has one row per gene where the fitting procedure
converged.
Examples
data(gamList, package = "tradeSeq")
getSmootherPvalues(gamList)
statOmics/tradeSeq documentation built on Jan. 19, 2024, 8:26 p.m.
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View source: R/getSmootherTestStats.R
| getSmootherTestStats | R Documentation |
Get smoother Chi-squared test statistics.
Description
Return test statistics from the mgcv package.
Usage
getSmootherTestStats(models)
Arguments
models |
the GAM models, typically the output from |
Value
a matrix with the wald statistics associated with each lineage's smoother. The matrix has one row per gene where the fitting procedure converged.
Examples
data(gamList, package = "tradeSeq")
getSmootherPvalues(gamList)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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