savesim: Save Simulation Data from Stochastic Network Models

In statnet/EpiModelHPC: EpiModel Extensions for High-Performance Computing

Save Simulation Data from Stochastic Network Models

Description

Saves an Rdata file containing stochastic network model output from netsim function calls with time-stamped file names.

Usage

savesim(
  sim,
  data.dir = "data/",
  save.min = TRUE,
  save.max = TRUE,
  time.stamp = TRUE,
  compress = FALSE
)

Arguments

sim	An EpiModel object of class netsim to be saved to an Rdata file.
data.dir	Path to save data files. Directory will be created if it does not already exist.
save.min	If TRUE, saves a small version of the netsim object in which large elements of the data structure like the network object and the transmission data frame are removed. The resulting name for this small file will have ".min" appended at the end.
save.max	If TRUE, saves the full netsim object without any deletions.
time.stamp	If TRUE, saves the file with a time stamp in the file name.
compress	Matches the compress argument for the save function.

Details

This function provides an automated method for saving a time-stamped Rdata file containing the simulation number of a stochastic network model run with netsim.

statnet/EpiModelHPC documentation built on Nov. 13, 2023, 11:38 a.m.