step_tmpl_renv_restore: Step template to update a project 'renv'

In statnet/EpiModelHPC: EpiModel Extensions for High-Performance Computing

Step template to update a project renv

Description

This template makes the step run ⁠git pull⁠ and renv::restore(). This could help ensure that the project is up to date when running the rest of the workflow. See slurmworkflow::step_tmpl_bash_lines for details on step templates

Usage

step_tmpl_renv_restore(git_branch, setup_lines = NULL)

Arguments

git_branch	The git branch that the project is supposed to follow. If the project is not following the right branch, this step will error.
setup_lines	(optional) a vector of bash lines to be run first. This can be used to load the required modules (like R, python, etc).

Value

a template function to be used by add_workflow_step

statnet/EpiModelHPC documentation built on Nov. 13, 2023, 11:38 a.m.