Rscexv: Rscexv

In stela2502/Rscexv: The backend for the SCExV (single cell expression view) server.

Rscexv

Description

This S4 class implements the SCExV backend logics

Slots

data

a data.frame containing the expression values for each gene x sample (gene = row)

facs

a data.frame containing all the FACS data

samples

a data.frame describing the columnanmes in the data column

annotation

a data.frame describing the rownames in the data rows

outpath

the default outpath for the plots and tables from this package

name

the name for this package (all filesnames contain that)

zscored

genes are normalized?

snorm

samples normalized?

normFunct

which PCR norm function has been called

rownamescol

the column name in the annotation table that represents the rownames of the data table

sampleNamesCol

the column name in the samples table that represents the colnames of the data table

usedObj

here a set of used and probably lateron important objects can be saved. Be very carful using any of them!

stela2502/Rscexv documentation built on July 6, 2022, 9:02 p.m.