R/dictionary.R
In stemangiola/ttBulk: Brings transcriptomics to the tidyverse
# Dictionary
scaled_string = "_scaled"
adjusted_string = "_adjusted"
warning_for_scaling_with_few_genes = "tidybulk says: There are < 100 features/genes that are present in all you samples. Because edgeR::calcNormFactors does not allow NAs, the scaling is performed on that limited set of features.genes. The scaling could not be accurate, it is adivasble to perform impute_missing_abundance() before scaling. It is possible to filter the imputed counts after scaling."
stemangiola/ttBulk documentation built on April 10, 2024, 3:36 p.m.
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# Dictionary
scaled_string = "_scaled"
adjusted_string = "_adjusted"
warning_for_scaling_with_few_genes = "tidybulk says: There are < 100 features/genes that are present in all you samples. Because edgeR::calcNormFactors does not allow NAs, the scaling is performed on that limited set of features.genes. The scaling could not be accurate, it is adivasble to perform impute_missing_abundance() before scaling. It is possible to filter the imputed counts after scaling."
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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