API for stephenslab/flashr2
Empirical Bayes Matrix Factorization

Global functions
NM_posterior_e_loglik Source code
compute_precision Source code
e_loglik Source code
e_loglik_from_R2_and_tau Source code
ebnm_ash Man page Source code
ebnm_pl Man page Source code
ebnm_pn Man page Source code
find_col_blocks Source code
flash Man page Source code
flash_add_factors_from_data Man page Source code
flash_add_fixed_f Man page Source code
flash_add_fixed_l Man page Source code
flash_add_greedy Man page Source code
flash_add_lf Man page Source code
flash_backfit Man page Source code
flash_combine Source code
flash_default_ebnm_param Source code
flash_f_sampler Man page Source code
flash_fill Man page Source code
flash_get_R Source code
flash_get_R2 Source code
flash_get_R2k Source code
flash_get_R_withmissing Source code
flash_get_Rk Source code
flash_get_conv_criteria Source code
flash_get_f Source code
flash_get_k Man page Source code
flash_get_l Source code
flash_get_ldf Man page Source code
flash_get_lf Man page Source code
flash_get_n Source code
flash_get_objective Man page Source code
flash_get_p Source code
flash_get_pve Man page Source code
flash_init_fn Source code
flash_init_lf Source code
flash_init_null Source code
flash_init_udv Source code
flash_l_sampler Man page Source code
flash_lf_sampler Man page Source code
flash_lf_sampler_fixedf Source code
flash_lf_sampler_fixedl Source code
flash_optimize_single_fl Source code
flash_optimize_single_fl_old Source code
flash_plot_factors Man page Source code
flash_plot_pve Man page Source code
flash_r1 Source code
flash_r1_old Source code
flash_set_data Man page Source code
flash_subset_data Source code
flash_subset_f Source code
flash_subset_l Source code
flash_transpose Source code
flash_transpose_data Source code
flash_update_precision Man page Source code
flash_update_single_factor Source code
flash_update_single_fl Source code
flash_update_single_loading Source code
flash_zero_out_factor Man page Source code
get_Yorig Source code
is_tiny_fl Source code
mle_precision_by_column Source code
mle_precision_constant Source code
perform_nullcheck Source code
plot_one_factor Man page Source code
r1_opt Source code
sampler Source code
udv_random Man page Source code
udv_si Man page Source code
udv_si_svd Man page Source code
udv_svd Man page Source code
update_f_from_r1_opt_results Source code
stephenslab/flashr2 documentation built on April 29, 2018, 1:17 p.m.