# Created 12/31/14
#' Plot multiple ggplots in one window
#'
#' @author Steven H. Ranney
#'
#' @description This function takes multiple \code{\link{ggplot}} objects and
#' puts them in one plot window.
#'
#' @param ... The plots to include in the window
#' @param plotlist If a \code{plotlist} exists, it should be included here
#' @param file A plot file
#' @param cols How many columns should the window have?
#' @param layout A matrix specifying the layout. If present, \code{cols} is ignored.
#'
#' @details If the layout is something like \code{matrix(c(1,2,3,3), nrow=2, byrow=TRUE)},
#' then plot 1 will go in the upper left, 2 will go in the upper right, and
#' 3 will go all the way across the bottom.
#'
#' @export
plot_multiple_objects <- function(..., plotlist=NULL, file, cols=1, layout=NULL){
#Make a list from the ... arguments and plotlist
plots <- c(list(...), plotlist)
numPlots = length(plots)
# If layout is NULL, then use 'cols' to determine layout
if (is.null(layout)) {
# Make the panel
# ncol: Number of columns of plots
# nrow: Number of rows needed, calculated from # of cols
layout <- matrix(seq(1, cols * ceiling(numPlots/cols)),
ncol = cols, nrow = ceiling(numPlots/cols))
}
if (numPlots==1) {
print(plots[[1]])
} else {
# Set up the page
grid.newpage()
pushViewport(viewport(layout = grid.layout(nrow(layout), ncol(layout))))
# Make each plot, in the correct location
for (i in 1:numPlots) {
# Get the i,j matrix positions of the regions that contain this subplot
matchidx <- as.data.frame(which(layout == i, arr.ind = TRUE))
print(plots[[i]], vp = viewport(layout.pos.row = matchidx$row,
layout.pos.col = matchidx$col))
} #end for loop
} # end else
}
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