This package builds on existing tools and adds some simple but extremely useful capabilities for working wth ChIP-Seq data. The focus is on detecting differential binding windows/regions. One set of functions focusses on set-operations retaining mcols for GRanges objects, whilst another group of functions are to aid visualisation of results. Coercion to tibble objects is also implemented.
Package details |
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Bioconductor views | ChIPSeq Coverage HiC Sequencing |
Maintainer | |
License | GPL-3 |
Version | 1.9.6 |
URL | https://github.com/smped/extraChIPs |
Package repository | View on GitHub |
Installation |
Install the latest version of this package by entering the following in R:
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