dot-mapGi: Map ranges to genes via Interactions

In steveped/chipExtra: Additional functions for working with ChIP-Seq data

Map ranges to genes via Interactions

Description

Map ranges to genes via Interactions

Usage

.mapGi(.gr, .gi, .genes, .cols, .gr2gi, .gi2gene, ...)

Arguments

.gr	The ranges to map onto
.gi	GInteractions object
.genes	GRanges object containing gene-level information
.cols	The columns from .genes to map onto .gr
.gr2gi	The maximum distance between ranges and anchors
.gi2gene	The maximum distance between anchors & genes
...	Passed to findOverlaps

Value

data.frame of mapped ranges

steveped/chipExtra documentation built on May 2, 2024, 12:11 p.m.