getGC: Get Theoretical GC content

In steveped/ngsReports: Load FastqQC reports and other NGS related files

Get Theoretical GC content

Description

Get the GC content data from a TheoreticalGC object

Usage

getGC(object, name, type)

## S4 method for signature 'ANY'
getGC(object, type)

## S4 method for signature 'TheoreticalGC'
getGC(object, name, type)

Arguments

object	An object of class Theoretical GC
name	The Name of the species in 'Gspecies' format, e.g. Hsapiens
type	The type of GC content. Can only be either "Genome" or "Transcriptome"

Value

A tibble object

Examples

getGC(gcTheoretical, name = "Hsapiens", type = "Genome")

steveped/ngsReports documentation built on July 24, 2024, 10:45 a.m.