Create.2.7a.7b.Abstract: This function supersedes the second part of...
In steverozen/SynSigGen: Create Catalogs of Synthetic Mutational Spectra

Create.2.7a.7b.Abstract

R Documentation

This function supersedes the second part of `data-raw/Create.2.7a.7b.Rmd`.

Description

With default arguments, this function generates the same results as the second half of data-raw/Create.2.7a.7b.Rmd.

Usage

Create.2.7a.7b.Abstract(
  seed = 55,
  overwrite = TRUE,
  regress.dir = "data-raw/long.test.regression.data/syn.2.7a.7b.abst/",
  num.syn.tumors = 1000,
  top.level.dir = NULL,
  unlink = FALSE
)

Arguments

`seed`	A random seed to use.
`overwrite`	If TRUE, overwrite existing directories and files.
`regress.dir`	If not `NULL`, compare the result to the contents of this directory with a `diff`.
`num.syn.tumors`	The number of tumors to create for each cancer type in `cancer.types`.
`top.level.dir`	The directory in which to put the output; will be created if necessary.
`unlink`	If `TRUE` and `!is.null(regress.dir)`, then unlink the result directory if there are no differences.