API for stewid/SimInf
A Framework for Data-Driven Stochastic Disease Spread Simulations

Global functions
C_code Man page Source code
C_code_mparse Source code
C_heading Source code
C_include Source code
C_ptsFun Source code
C_run Source code
C_trFun Source code
G_label Source code
G_rownames Source code
Nc Source code
Nd Source code
Nn Man page Source code
Nt Source code
SEIR Man page Source code
SEIR-class Man page
SIR Man page Source code
SIR-class Man page
SISe Man page Source code
SISe-class Man page
SISe3 Man page Source code
SISe3-class Man page
SISe3_sp Man page Source code
SISe3_sp-class Man page
SISe_sp Man page Source code
SISe_sp-class Man page
SimInf Man page
SimInf-package Man page
SimInf_events Man page Source code
SimInf_events-class Man page
SimInf_model Man page Source code
SimInf_model-class Man page
SimInf_model_dll-class Man page
U<- Man page
V<- Man page
as_t_matrix Source code
boxplot,SimInf_model-method Man page
check_end_t_arg Source code
check_gdata_arg Source code
check_infectious_pressure_arg Source code
check_integer_arg Source code
check_model_argument Source code
compile_model Man page Source code
contains_C_code Source code
create_DESCRIPTION_file Source code
create_NAMESPACE_file Source code
create_model_C_file Source code
create_model_R_SimInf_timestamp Source code
create_model_R_class Source code
create_model_R_file Source code
create_model_R_object Source code
create_model_R_object_E Source code
create_model_R_object_G Source code
create_model_R_object_N Source code
create_model_R_object_S Source code
create_model_R_object_SimInf_model Source code
create_model_R_object_function Source code
create_model_R_object_gdata Source code
create_model_R_object_ldata Source code
create_model_R_object_roxygen Source code
create_model_R_object_u0 Source code
create_model_R_object_v0 Source code
create_model_class_man_file Source code
create_model_man_file Source code
create_model_run_fn Source code
create_model_run_man_file Source code
distance_matrix Man page Source code
do_compile_model Source code
events Man page Source code
events_SEIR Man page Source code
events_SIR Man page Source code
events_SISe Man page Source code
events_SISe3 Man page
gdata Man page Source code
gdata<- Man page
have_openmp Source code
indegree Man page Source code
is_wholenumber Source code
ldata Man page Source code
mparse Man page Source code
nodes Man page
onUnload Source code
outdegree Man page Source code
package_skeleton Man page Source code
pairs,SimInf_model-method Man page
parse_compartments Source code
parse_transitions Source code
plot,SimInf_events-method Man page
plot,SimInf_model-method Man page
plot_SimInf_events Source code
prevalence Man page Source code
rewrite_propensity Source code
run Man page
run,SimInf_model-method Man page
run,SimInf_model_dll-method Man page
run_outer Man page Source code
select_matrix Man page Source code
select_matrix<- Man page
shift_matrix Man page Source code
shift_matrix<- Man page
show,SimInf_events-method Man page
show,SimInf_model-method Man page
sparse2df Source code
summary,SimInf_events-method Man page
summary,SimInf_model-method Man page
summary_U Source code
summary_V Source code
summary_events Source code
summary_gdata Source code
summary_ldata Source code
summary_transitions Source code
tokens Source code
trajectory Man page Source code
u0_SEIR Man page Source code
u0_SIR Man page Source code
u0_SISe Man page Source code
u0_SISe3 Man page
stewid/SimInf documentation built on Nov. 15, 2018, 5:41 p.m.