Man pages for stoufferlab/phyloint
Phylogenetic components of food-web intervality
| build.matrix.from.traits | Build a predicted adjacency matrix based on trait values |
| eklof | Sample food-web dataset with which to study phylogenetic... |
| minimize.phylo.gaps.sa | Minimize diet gaps in an adjacency matrix based on prey... |
| minimize.phylo.gaps.sd | Minimize diet gaps in an adjacency matrix based on prey... |
| overlap.combinations | Calculate the overlap based on combinations of traits |
| phylo.correction | Remove potential phylogenetic signal from a set of continuous... |
| phyloint | phyloint. |
| phylo.signal | Function to compute phylogenetic signal of a discrete trait... |
| plot.phylo.gaps | Plot a tree coordinate object in the xy plane and an ordered... |
| sa.start | Estimate a starting temperature for simulated annealing |
| sum.phylo.gaps | Calculate the number of diet gaps in an adjacency matrix... |
| swap.tree | Permute a pair of sister clades in a phylogenetic tree |
| tree.coord | Calculate the xy-coordinates of nodes in a phylogenetic tree |
