landscape.theta.h: Calculate theta using heterozygosity
In stranda/rmetasim: An Individual-Based Population Genetic Simulation Environment
View source: R/pegas_interface.R
landscape.theta.h R Documentation
Calculate theta using heterozygosity
Description
Calculate theta from a landscape based upon
heterozygosity.
Usage
landscape.theta.h(rland)
Arguments
rland
the Rmetasim landscape object
Details
Uses routines in the package 'ape'
Value
A matrix with num loci columns and num populations rows. Each element
reflects the estimated theta for that population x locus combination
See Also
landscape.theta.k, landscape.theta.s
Examples
exampleland <- landscape.new.example()
exampleland <- landscape.simulate(exampleland, 4)
theta.h.mat <- landscape.theta.h(exampleland)
theta.h.mat
stranda/rmetasim documentation built on Aug. 25, 2023, 12:22 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
View source: R/pegas_interface.R
| landscape.theta.h | R Documentation |
Calculate theta using heterozygosity
Description
Calculate theta from a landscape based upon heterozygosity.
Usage
landscape.theta.h(rland)
Arguments
rland |
the Rmetasim landscape object |
Details
Uses routines in the package 'ape'
Value
A matrix with num loci columns and num populations rows. Each element reflects the estimated theta for that population x locus combination
See Also
landscape.theta.k, landscape.theta.s
Examples
exampleland <- landscape.new.example()
exampleland <- landscape.simulate(exampleland, 4)
theta.h.mat <- landscape.theta.h(exampleland)
theta.h.mat
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.