View source: R/parse_crossovers.R
parse_crossovers: Parse crossover information from CriMAP chrompic output
1 2 | parse_crossovers(chrompicfile, familyPedigree,
remove.zero.inf.loci = TRUE)
|
chrompicfile |
File with output from chrompic |
familyPedigree |
data.frame containing columns ANIMAL, FATHER, MOTHER and FAMILY. FAMILY defines family groups for crimap. IDs in ANIMAL can be repeated within and between families if necessary. Should be that used in create_crimap_input. |
remove.zero.inf.loci |
Logical, default = TRUE. Remove IDs with no informative loci. |
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