create.dt: create.dt - convert a Seurat or SingleCellExperiment to a...

In sydneycytometry/Spectre: A computational toolkit in R for the integration, exploration, and analysis of high-dimensional single-cell cytometry data.

Description

This function converts a Seurat or SingleCellExperiment object into a list containing a data.table, with vectors of gene and dimensionality reduction

Usage

create.dt(dat, from)

Arguments

dat	NO DEFAULT. A Seurat or SingleCellExperiment object.
from	DEFAULT = NULL. By default, the class of object will be detected automatically, but this can be overwritten using from. Can be from = 'Seurat' or 'SingleCellExperiment'.

Author(s)

Thomas M Ashhurst, [e-mail]

References

https://github.com/ImmuneDynamics/Spectre.

sydneycytometry/Spectre documentation built on March 20, 2021, 2:15 a.m.