PlotLifeHistory: Plot Life History

Description Usage Arguments Value

View source: R/PlotLifeHistory.R

Description

Plots life history based on inputs from CTL file, used in GeMS

Usage

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PlotLifeHistory(LenAtAgeN, LenAtAgeS, matureN, matureS, vulnN, vulnS,
  survSelN, survSelS, WeightAtAgeN, WeightAtAgeS, MovementN, MovementS,
  NatMs, NatMn, VirBioN, VirBioS, RzeroN, RecErrN, steepnessN, steepnessS,
  RzeroS, RecErrS, sigmaRn, sigmaRs, HistoricalFn, HistoricalFs, SimYear,
  MaxAge)

Arguments

LenAtAgeN

Matrix of lengths at age for northern population

LenAtAgeS

Matrix of lengths at age for southern population

matureN

Proportions mature for northern population

matureS

Proportions mature for southern population

vulnN

Vulnerability matrix for northern population

vulnS

Vulnerability matrix for southern population

survSelN

Survey selectivity matrix for northern population

survSelS

Survey selectivity matrix for southern population

WeightAtAgeN

Weight-at-age matrix for northern population

WeightAtAgeS

Weight-at-age matrix for southern population

MovementN

Proportion of emigration to the southern population

MovementS

Proportion of immigration into the northern population

NatMs

Natural Mortality for southern population

NatMn

Natural Mortality for northern population

VirBioN

Initial virgin biomass for northern population

VirBioS

Initial virgin biomass for southern population

RzeroN

Virgin recruitment parameter for northern population

steepnessN

Steepness parameter for northern population

steepnessS

Steepness parameter for southern population

RzeroS

Virgin recruitment parameter for southern population

RecErrS

Recruitment deviations

sigmaRn

Recruitment variability for northern population

sigmaRs

Recruitment variability for southern population

HistoricalFn

Vector of historical fishing mortalities for northern population

HistoricalFs

Vector of historical fishing mortalities for southern population

SimYear

Year of simulation

MaxAge

Maximum age

Value

Plots plots plots


szuwalski/GeMS documentation built on Oct. 2, 2019, 5:55 a.m.