AgeStructureComp: Age-Structure Comparison
In szuwalski/GeMS: Generic Management Strategy Evaluation

Description Usage Arguments Value Examples

Compare and plot age-structured models

Used within the run_GeMS function, can also be run on its own.

1 2	AgeStructureComp(out, RetroPeels = 6, CTLNameList, MSEdir, plotNames = NA, Nruns = NA, plottiff = F)

`out`	List output from `ReadCTLfile`
`RetroPeels`	Number of years to peel for retrospective analysis
`CTLNameList`	Vector of CTL file names
`MSEdir`	Directory containing CTL files
`plotNames`	Vector of the same length as CTLNameList with "prettier" names for plotting
`Nruns`	Number of runs to plot in Population Processes plots (selectivity and growth)
`plottiff`	Logical; make plots in TFF instead of PNG?

Plots comparing age-structured estimating models

## Not run: 
MSEdir <- "~/GeneralMSE/Examples/Cod_5_AgeStructure"
OMNames <- c("Cod_AgeStructure_CTL","Cod_Age_Mvary_CTL","Cod_Age_Mvary_estM_CTL")
out <- ReadCTLfile(OMNames[1])
AgeStructureComp(out=out,
                 CTLNameList=OMNames,
                 MSEdir=MSEdir,
                 plotNames=c("Base","Fixed M","Estimate M"))

## End(Not run)