Files in tanaylab/repsc
Single-cell expression analysis of transposable elements
.Rbuildignore
.Rhistory
.gitignore
DESCRIPTION
NAMESPACE
NEWS.md
R/accessors.R
R/add.R
R/annotate.R
R/check.R
R/compute.R
R/curate.R
R/export.R
R/filter_select.R
R/package-Repsc.R
R/plot.R
R/scSet.R
R/transform.R
R/utilities.R
R/zzz.R
README.Rmd
README.md
Schematic.ai
_pkgdown.yml
docs/404.html
docs/apple-touch-icon-120x120.png
docs/apple-touch-icon-152x152.png
docs/apple-touch-icon-180x180.png
docs/apple-touch-icon-60x60.png
docs/apple-touch-icon-76x76.png
docs/apple-touch-icon.png
docs/articles/3'scRNA_mouse.html
docs/articles/5'_vs_3'_comparison.html
docs/articles/5'scRNA_human.html
docs/articles/5'scRNA_mouse.html
docs/articles/Prerequisites.html
docs/articles/Repsc.html
docs/articles/Smartseq2_mouse.html
docs/articles/index.html
docs/authors.html
docs/docsearch.css
docs/docsearch.js
docs/favicon-16x16.png
docs/favicon-32x32.png
docs/favicon.ico
docs/index.html
docs/link.svg
docs/logo.svg
docs/news/index.html
docs/pkgdown.css
docs/pkgdown.js
docs/pkgdown.yml
docs/reference/Repexpr.html
docs/reference/Repsc.html
docs/reference/addBinExtension.html
docs/reference/addCounts.html
docs/reference/annoClass.html
docs/reference/calcBackground.html
docs/reference/callCells.html
docs/reference/checkInput.html
docs/reference/compCounts.html
docs/reference/counts.html
docs/reference/createScSet.html
docs/reference/export.html
docs/reference/figures/logo.png
docs/reference/figures/read_cov_by_protocol.png
docs/reference/figures/schematic.png
docs/reference/genes.html
docs/reference/index.html
docs/reference/normCounts.html
docs/reference/plotCells.html
docs/reference/plotFeatures.html
docs/reference/plotPeaks.html
docs/reference/repnames.html
docs/reference/scSet-class.html
docs/reference/selectCells.html
docs/reference/selectFeatures.html
docs/reference/selectPeaks.html
docs/reference/tes.html
index.Rmd
logo.ai
logo.svg
man/Repsc.Rd
man/addCounts.Rd
man/annoClass.Rd
man/calcBackground.Rd
man/checkInput.Rd
man/compCounts.Rd
man/counts.Rd
man/createScSet.Rd
man/export.Rd
man/genes.Rd
man/normCounts.Rd
man/plotCells.Rd
man/plotFeatures.Rd
man/plotMapping.Rd
man/plotPeaks.Rd
man/repnames.Rd
man/scSet-class.Rd
man/selectCells.Rd
man/selectFeatures.Rd
man/selectPeaks.Rd
man/tes.Rd
pkgdown/favicon/apple-touch-icon-120x120.png
pkgdown/favicon/apple-touch-icon-152x152.png
pkgdown/favicon/apple-touch-icon-180x180.png
pkgdown/favicon/apple-touch-icon-60x60.png
pkgdown/favicon/apple-touch-icon-76x76.png
pkgdown/favicon/apple-touch-icon.png
pkgdown/favicon/favicon-16x16.png
pkgdown/favicon/favicon-32x32.png
pkgdown/favicon/favicon.ico
read_cov_by_protocol.ai
vignettes/10x_5'_epitherapy.Rmd
vignettes/10x_5'_mESC.Rmd
vignettes/10x_5__mESC.html
vignettes/5_scRNA_human.html
vignettes/5_scRNA_mouse.html
vignettes/Prerequisites.Rmd
vignettes/_10x_embryo_3'.Rmd
vignettes/_5'_vs_3'_comparison.Rmd
vignettes/_5'scRNA_human.Rmd
vignettes/_5'scRNA_mouse.Rmd
vignettes/_MARSeq_ESEB_mouse.Rmd
vignettes/_Smartseq2_mouse.Rmd
