tanaylab/repsc
Single-cell expression analysis of transposable elements

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addCounts: Add TE/Gene counts to scSet

addCounts: Add TE/Gene counts to scSet
In tanaylab/repsc: Single-cell expression analysis of transposable elements

Description Usage

View source: R/add.R

Description

Add TE/Gene counts to scSet

Usage

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addCounts(scSet, bams = NULL, msa_dir = NULL,
  te_exon_overlap = "filter", hierarchy = "locus", bin_size = NA,
  min_cell_size = 100, use_gcluster = FALSE)

tanaylab/repsc documentation built on Jan. 9, 2021, 9:39 a.m.

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