tanaylab/shaman: shaman - Sampling HiC contAct Matrices for Aparametric Normalization

Generate expected HiC data maintaining marginal coverage, and the decay in contact probability with increasing genomic distance. Expected HiC data is used for normalization and graphical presenstation of statistical significance of observed HiC contact enrichments.

Getting started

Package details

Maintainer
LicenseGPL
Version2.0
URL http://tanaylab.bitbucket.io/shaman https://bitbucket.com/tanaylab/shaman
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("tanaylab/shaman")
tanaylab/shaman documentation built on Nov. 5, 2019, 9:58 a.m.