inferMagicFounder: Infer most likely founder for a given SNP
In tavareshugo/MagicHelpR: QTL mapping in Arabidopsis MAGIC lines
Description
Usage
Arguments
Value
Examples
Description
Infer most likely founder for a given SNP
Usage
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inferMagicFounder(x, marker, prob_thr = 0.5)
## S4 method for signature 'MagicGenPhen'
inferMagicFounder(x, marker, prob_thr = 0.5)
Arguments
x
an object of class MagicData.
marker
name of SNP marker to infer founder.
prob_thr
probability threshold for attributing a genotype to a founder.
Value
a data.frame with the most likely founder for each MAGIC line.
Examples
1
# to be added...
tavareshugo/MagicHelpR documentation built on May 4, 2020, 3:01 p.m.
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Description Usage Arguments Value Examples
Description
Infer most likely founder for a given SNP
Usage
1 2 3 4 | inferMagicFounder(x, marker, prob_thr = 0.5)
## S4 method for signature 'MagicGenPhen'
inferMagicFounder(x, marker, prob_thr = 0.5)
|
Arguments
x |
an object of class MagicData. |
marker |
name of SNP marker to infer founder. |
prob_thr |
probability threshold for attributing a genotype to a founder. |
Value
a data.frame with the most likely founder for each MAGIC line.
Examples
1 | # to be added...
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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