API for tbradley1013/KEGGerator
Identify genomic functionality with KEGG
| Global functions | |
|---|---|
| %>% | Man page |
| as_keggerator | Man page Source code |
| as_keggerator.phyloseq | Man page Source code |
| check_otu_id | Source code |
| check_otu_id.otu_table | Source code |
| check_otu_id.phyloseq | Source code |
| filter_orgs | Man page Source code |
| filter_orgs.keggerator | Man page Source code |
| filter_orgs.orgs_list | Source code |
| filter_orgs_internal | Source code |
| filter_orgs_pathway | Source code |
| filter_orgs_uncert | Source code |
| filter_pathway | Source code |
| genomic_func_heatmap | Man page Source code |
| get_datasets | Man page |
| get_enzyme_modules | Man page Source code |
| get_enzymes | Man page Source code |
| get_enzymes.keggerator | Man page Source code |
| get_enzymes.orgs_id | Man page Source code |
| get_kegg_enzyme | Man page Source code |
| get_kegg_module | Man page Source code |
| get_kegg_orthology | Man page Source code |
| get_kegg_pathway | Man page Source code |
| get_org_ids | Man page Source code |
| get_org_ids.keggerator | Man page Source code |
| get_org_ids.orgs_list | Man page Source code |
| get_org_ids.orgs_tbl | Source code |
| get_orthologies | Man page Source code |
| get_orthologies.keggerator | Man page Source code |
| get_orthologies.orgs_id | Man page Source code |
| get_orthology_modules | Man page Source code |
| get_pathway_enzymes | Man page Source code |
| get_pathway_modules | Man page Source code |
| get_pathway_orthologies | Man page Source code |
| has_complete_function | Man page Source code |
| has_specific_function | Man page Source code |
| ids_match | Source code |
| is_filtered | Source code |
| is_kegg_tbl | Man page Source code |
| is_keggerator | Source code |
| is_keggtap | Source code |
| is_orgs_id | Source code |
| is_orgs_list | Source code |
| is_orgs_tbl | Source code |
| is_otu_ref | Source code |
| is_otu_tbl | Source code |
| is_sam_tbl | Source code |
| is_tax_tbl | Source code |
| is_uncert_tbl | Source code |
| keggerator | Man page Source code |
| keggerator_uncertainty | Man page Source code |
| keggerator_uncertainty.keggerator | Man page Source code |
| keggerator_uncertainty.orgs_list | Man page Source code |
| keggtap | Man page Source code |
| null_check_opt | Source code |
| null_check_req | Source code |
| orgs_tibble | Man page Source code |
| orgs_tibble.keggerator | Man page Source code |
| orgs_tibble.phyloseq | Man page Source code |
| orgs_tibble.tax_tbl | Man page Source code |
| otu_ref | Man page Source code |
| otu_ref.otu_table | Man page Source code |
| otu_ref.otu_tbl | Man page Source code |
| otu_ref.phyloseq | Man page Source code |
| otu_ref.tax_tbl | Man page Source code |
| otu_ref.taxonomyTable | Man page |
| otu_tibble | Man page Source code |
| otu_tibble.otu_table | Man page Source code |
| otu_tibble.phyloseq | Man page Source code |
| reexports | Man page |
| sam_tibble | Man page Source code |
| sam_tibble.phyloseq | Man page Source code |
| sam_tibble.sample_data | Man page Source code |
| tax_tibble | Man page Source code |
| tax_tibble.phyloseq | Man page Source code |
| tax_tibble.taxonomyTable | Man page Source code |
| tax_to_tbl | Source code |
| uncertainty_internal | Source code |
