otu_ref: Create a otu reference table

In tbradley1013/KEGGerator: Identify genomic functionality with KEGG

Description

Create a otu reference table

Usage

otu_ref(data, otu, tax)

## S3 method for class 'phyloseq'
otu_ref(data)

## S3 method for class 'otu_table'
otu_ref(otu, tax)

## S3 method for class 'taxonomyTable'
otu_ref(otu, tax)

## S3 method for class 'tax_tbl'
otu_ref(tax)

## S3 method for class 'otu_tbl'
otu_ref(otu)

Arguments

data	an object to convert to otu_ref

Methods (by class)

• phyloseq: method for phyloseq object

• otu_table: method for otu_table

• taxonomyTable: method for taxonomyTable object

• tax_tbl: method for tax_tbl object

• otu_tbl: method for otu_tbl object

tbradley1013/KEGGerator documentation built on Feb. 23, 2020, 6:44 a.m.