Files in tdmore-dev/tdmore
In silico evaluation of precision dosing
.Rbuildignore
.covrignore
.dockerignore
.gitattributes
.gitignore
.travis.yml
DESCRIPTION
Dockerfile
LICENSE.md
NAMESPACE
R/RxODE.R
R/algebraic.R
R/algebraicLibrary.R
R/check.R
R/data.R
R/ebe.R
R/errorModel.R
R/ggplot.R
R/ggplot.autolayer.R
R/loadModel.R
R/metadata.R
R/model.R
R/modelLibrary.R
R/modelMixture.R
R/mpc.R
R/nlmixr.R
R/optimize.R
R/plot.R
R/profile.R
R/progress.R
R/proseval.R
R/recommendation.R
R/regimen.R
R/roxygen2.R
R/shinyProfile.R
R/tdmore-package.R
R/utilities.R
README.md
_pkgdown.yml
data-raw/PHENO
data-raw/THEOPP
data-raw/modelLibrary.R
data-raw/pheno.R
data-raw/theo.R
data/pheno.rda
data/pheno_nlmixr.rda
data/theopp.rda
data/theopp_nlmixr.rda
docker-compose.test.yml
inst/benchmark/EMPTY_ON_PURPOSE
inst/examples/RxODE.R
inst/install.R
inst/models/default.R
inst/models/example.R
inst/models/example2.R
inst/models/example_1param.R
inst/models/example_iov.R
inst/models/example_pkpd.R
inst/models/example_wt.R
inst/models/two_error_models.R
inst/validation/Monolix/oral1_2cpt_TlagkaClV1QV2.txt.R
inst/validation/Monolix/validation_theo.R
inst/validation/NONMEM/B00FO.CTL
inst/validation/NONMEM/B01FOi.CTL
inst/validation/NONMEM/B10FOCE.CTL
inst/validation/NONMEM/B11FOCEi.CTL
inst/validation/NONMEM/B20LAPL.CTL
inst/validation/NONMEM/B21LAPLi.CTL
inst/validation/NONMEM/C00FO.CTL
inst/validation/NONMEM/C01FOi.CTL
inst/validation/NONMEM/C10FOCE.CTL
inst/validation/NONMEM/C11FOCEi.CTL
inst/validation/NONMEM/C20LAPL.CTL
inst/validation/NONMEM/C21LAPLi.CTL
inst/validation/NONMEM/validation.R
logo.png
logo.svg
man/algebraic.Rd
man/as.population.Rd
man/as.sample.Rd
man/autolayer.recommendation.Rd
man/autoplot.tdmore.Rd
man/autoplot.tdmorefit.Rd
man/autoplot.tdmorefit_mixture.Rd
man/covariate.Rd
man/dataTibble.Rd
man/defaultModel.Rd
man/doseSimulation.Rd
man/ensurePackagePresent.Rd
man/errorModel.Rd
man/formula.tdmorefit.Rd
man/formulation.Rd
man/getDosingInterval.Rd
man/getMetadataByClass.Rd
man/getMetadataByName.Rd
man/getModel.Rd
man/getObservedVariables.Rd
man/linCmt.Rd
man/logLik.tdmorefit.Rd
man/metadata.Rd
man/model.frame.tdmore.Rd
man/model.frame.tdmorefit.Rd
man/mpc.Rd
man/observed_variables.Rd
man/output.Rd
man/parameterPlot.tdmorefit.Rd
man/pheno.Rd
man/pheno_nlmixr.Rd
man/pk.Rd
man/pk_.Rd
man/pkmodel.Rd
man/posthoc.Rd
man/predict.tdmore.Rd
man/predict.tdmore_mpc.Rd
man/predict.tdmorefit.Rd
man/predictionLayer.Rd
man/residuals.Rd
man/target.Rd
man/tdmore.Rd
man/tdmore.algebraic.Rd
man/tdmore_mixture.Rd
man/tdmore_mixture_covariates.Rd
man/theopp.Rd
man/theopp_nlmixr.Rd
pkgdown/favicon/apple-touch-icon-120x120.png
pkgdown/favicon/apple-touch-icon-152x152.png
pkgdown/favicon/apple-touch-icon-180x180.png
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pkgdown/favicon/apple-touch-icon.png
pkgdown/favicon/favicon-16x16.png
pkgdown/favicon/favicon-32x32.png
pkgdown/favicon/favicon.ico
renv.lock
renv/.gitignore
renv/settings.dcf
tdmore.Rproj
tests/figs/algebraic-function-model-predict.svg
tests/figs/algebraic-function-predict.svg
tests/figs/default-tdmore-plot.svg
tests/figs/deps.txt
tests/figs/dosesimulation-sample.svg
tests/figs/ecl-different-ev1.svg
tests/figs/ecl-optimized-ev1.svg
tests/figs/ipred-1cmt-profile.svg
tests/figs/ipred-1cmt.svg
tests/figs/ipred-tdmore-plot.svg
tests/figs/ipred2-tdmore-plot.svg
tests/figs/ipred2-tdmore-plot2.svg
tests/figs/population-sample.svg
tests/figs/pred-tdmore-plot.svg
tests/figs/profile-limits.svg
tests/figs/profile-on-ka.svg
tests/figs/recommendation-hits-target-1.svg
tests/figs/recommendation-hits-target-2.svg
tests/figs/recommendation-hits-target-3.svg
tests/shinytest/profile/app.R
tests/shinytest/profile/tests/shinytest.R
tests/shinytest/profile/tests/shinytest/test-expected/EV1,ECL-profiled
tests/shinytest/profile/tests/shinytest/test-expected/EV1,ECL-profiled.png
tests/shinytest/profile/tests/shinytest/test-expected/EV1-estimated-ECL-profiled
tests/shinytest/profile/tests/shinytest/test-expected/EV1-estimated-ECL-profiled.png
tests/shinytest/profile/tests/shinytest/test-expected/EV1-fixed-ECL-profiled
tests/shinytest/profile/tests/shinytest/test-expected/EV1-fixed-ECL-profiled.png
tests/shinytest/profile/tests/shinytest/test-expected/EV1-profile-ECL-estimated
tests/shinytest/profile/tests/shinytest/test-expected/EV1-profile-ECL-estimated.png
tests/shinytest/profile/tests/shinytest/test-expected/EV1-profile-ECL-fixedDiffValue
tests/shinytest/profile/tests/shinytest/test-expected/EV1-profile-ECL-fixedDiffValue.png
tests/shinytest/profile/tests/shinytest/test-expected/EV1-profiled-ECL-fixed
tests/shinytest/profile/tests/shinytest/test-expected/EV1-profiled-ECL-fixed.png
tests/shinytest/profile/tests/shinytest/test.R
tests/testthat.R
tests/testthat/_snaps/test1ParamModel.md
tests/testthat/_snaps/testAlgebraic.md
tests/testthat/_snaps/testEbe.md
tests/testthat/_snaps/testRxODE.md
tests/testthat/estimate_theo.runtime.txt
tests/testthat/helperBenchmark.R
tests/testthat/helperPhantomjs.R
tests/testthat/helperVdiffr.R
tests/testthat/ref/theo_sd_nlmixr.RDs
tests/testthat/test1ParamModel.R
tests/testthat/testAlgebraic.R
tests/testthat/testAsPopulation.R
tests/testthat/testCovariates.R
tests/testthat/testEbe.R
tests/testthat/testFindDose.R
tests/testthat/testIOV.R
tests/testthat/testLibrary.R
tests/testthat/testMPC.R
tests/testthat/testMetadata.R
tests/testthat/testModelFrame.R
tests/testthat/testMultipleEndpoints.R
tests/testthat/testNlmixr.R
tests/testthat/testOptimize.R
tests/testthat/testPlot.R
tests/testthat/testPredict.R
tests/testthat/testProfile.R
tests/testthat/testProseval.R
tests/testthat/testRxODE.R
tests/testthat/testShinytest.R
tests/testthat/testTarget.R
tests/testthat/testTheo.R
tests/testthat/testValidationVsNlmixr.R
vignettes/tdmore.Rmd
