tfojo1/jheem
Executes the JHEEM (Johns Hopkins Epidemiological and Economic Model) - a compartmental model of HIV

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Search the tfojo1/jheem package
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282
Source code
19
Man pages
94
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tfojo1/jheem: Executes the JHEEM (Johns Hopkins Epidemiological and Economic Model) - a compartmental model of HIV
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API for tfojo1/jheem
Executes the JHEEM (Johns Hopkins Epidemiological and Economic Model) - a compartmental model of HIV

Global functions
OLD.expand.jheem.results Source code
access Man page Source code
access<- Man page
all.indices.of Source code
append.repeat.names Source code
array.matches.dimnames Source code
check.access.names Source code
check.na.parameters Source code
check.transition.dimension Source code
check.transmission.route.names Source code
check.valid.transition.array.subset Source code
clean.keep.dimensions Source code
combine.jheem.results Man page Source code
convert.ratio.arr.to.df Source code
convert.to.cdc.array Source code
create.birth.proportions.from.population Man page Source code
create.birth.proportions.hiv.negative Man page Source code
create.birth.proportions.hiv.positive.to.negative Man page Source code
create.birth.proportions.hiv.positive.to.positive Man page Source code
create.contact.array.from.marginals Man page Source code
create.product.array.from.marginals Source code
create.susceptibility.array.from.marginals Man page Source code
create.time.varying.parameter.slot Source code
create.transmissibility.array.from.marginals Man page Source code
dims.present Source code
do.create.birth.proportions Source code
do.extract.population.subset Source code
do.extract.results Source code
do.get.population.skeleton Source code
do.set.birth.proportions Source code
do_expand_population Source code
do_expand_population_character Source code
do_get_access_indices Source code
do_marginal_sums_general Source code
do_marginal_sums_hiv_negative Source code
do_marginal_sums_hiv_positive Source code
dx_function Source code
expand.jheem.results Man page Source code
expand.population Source code
expand.population.to.general Man page Source code
expand.population.to.hiv.negative Man page Source code
expand.population.to.hiv.positive Man page Source code
expand.to.contact.array Man page Source code
expand.to.new.infection.proportions Man page Source code
expand.to.transition.array.hiv.negative Man page Source code
expand.to.transition.array.hiv.positive Man page Source code
extract.diagnosed.hiv Man page Source code
extract.hiv.specific.mortality Man page Source code
extract.incidence Man page Source code
extract.new.diagnoses Man page Source code
extract.overall.hiv.mortality Man page Source code
extract.population.subset Man page Source code
extract.prevalence Man page Source code
extract.tracked.transition Man page Source code
fractional.diff Source code
get.access.indices Source code
get.aging.skeleton.hiv.negative Man page Source code
get.aging.skeleton.hiv.positive Man page Source code
get.birth.proportions.to.hiv.negative.skeleton Man page Source code
get.character.list Source code
get.collapse.indices Source code
get.collapsed.dimnames Source code
get.contact.array.skeleton Man page Source code
get.contact.from.dim.indices Source code
get.default.keep.dimensions Source code
get.dimnames Source code
get.dimnames.all Source code
get.dimnames.birth.proportions Source code
get.dimnames.by.name Source code
get.dimnames.contacts Source code
get.dimnames.general Source code
get.dimnames.hiv Source code
get.dimnames.nonhiv Source code
get.dimnames.transitions Source code
get.from.hiv.negative.birth.proportion.dimnames Source code
get.from.hiv.positive.birth.proportion.dimnames Source code
get.general.population.skeleton Man page Source code
get.general.transition.array.skeleton Man page Source code
get.hiv.negative.population.skeleton Man page Source code
get.hiv.negative.transition.array.skeleton Man page Source code
get.hiv.positive.population.skeleton Man page Source code
get.hiv.positive.transition.array.skeleton Man page Source code
get.jheem.parameters Source code
get.jheem.result.dim.names Source code
get.jheem.results.dimnames Source code
get.new.infection.proportions.skeleton Man page Source code
get.non.subset.string Source code
get.ordinal Source code
get.population.skeleton Man page Source code
get.seeded.initial.populations Man page Source code
get.susceptibility.array.skeleton Man page Source code
get.to.hiv.negative.birth.proportion.dimnames Source code
get.to.hiv.positive.birth.proportion.dimnames Source code
get.tracked.transition.from.indices Source code
get.tracked.transition.order Source code
get.transition.array.skeleton Man page Source code
get.transition.dimnames Source code
get.transmissibility.array.skeleton Man page Source code
get.uniform.new.infection.proportions Man page Source code
hello Man page
hydrate.ode.results Source code
identify.dimnames.in.array Source code
index.of Source code
init.for.birth.proportions Source code
init.transition.tracking Source code
initialize.jheem Man page Source code
initialize.jheem.results Source code
intersect.list Source code
is.scalar Source code
jheem Man page
jheem.dimensions.match.results Source code
jheem.result.dimensions.are.subset Source code
jplot.hiv.specific.mortality Source code
jplot.incidence Source code
jplot.new.diagnoses Source code
jplot.overall.hiv.mortality Source code
jplot.prevalence Source code
jplot.ratios Source code
jplot.subpopulation Source code
list.equals Source code
make.age.strata Man page Source code
model.dx.Rcpp Source code
multiply.contact.array.from Man page Source code
multiply.contact.array.to Man page Source code
prepare.population.subset.df Source code
prepare.transition.mappings Source code
print_vector Source code
pull_time_varying_parameters Source code
rcpp_hello Man page
recategorize.for.cdc Source code
run.jheem Man page Source code
set.aging Man page Source code
set.aging.hiv.negative Man page Source code
set.aging.hiv.positive Man page Source code
set.birth.proportions.hiv.negative Man page Source code
set.birth.proportions.hiv.positive Man page Source code
set.birth.proportions.no.maternal.transmission Man page Source code
set.dim.name.names Source code
set.emigration Man page Source code
set.emigration.hiv.negative Man page Source code
set.emigration.hiv.positive Man page Source code
set.fertility Man page Source code
set.fertility.hiv.negative Man page Source code
set.fertility.hiv.positive Man page Source code
set.fixed.population.size Man page Source code
set.fixed.population.strata Man page Source code
set.fixed.size.strata Man page Source code
set.general.mortality Man page Source code
set.general.mortality.hiv.negative Man page Source code
set.general.mortality.hiv.positive Man page Source code
set.global.transmission.rate Man page Source code
set.hiv.specific.mortality Man page Source code
set.immigration.proportions Man page Source code
set.immigration.rate.dimensions Source code
set.immigration.rates Man page Source code
set.initial.population.hiv.negative Man page Source code
set.initial.population.hiv.positive Man page Source code
set.initial.populations Man page Source code
set.keep.strata.sizes.constant Man page Source code
set.new.infection.proportions Man page Source code
set.null.jheem Source code
set.susceptibility Man page Source code
set.time.varying.parameter.stepwise Source code
set.time.varying.parameter.value Source code
set.track.hiv.specific.mortality Man page Source code
set.track.incidence.dimensions Man page Source code
set.track.mortality Man page Source code Source code
set.track.overall.mortality Man page Source code
set.tracked.transition.hiv.negative Man page Source code
set.tracked.transition.hiv.positive Man page Source code
set.transition.array.hiv.negative Man page Source code
set.transition.array.hiv.positive Man page Source code
set.transmissibility Man page Source code
set.transmission.contact.array Man page Source code
set.use.fixed.population Man page Source code
setdiff.list Source code
stratify.males.by.orientation Man page Source code
stratify.population Man page Source code
subset.jheem.results Man page Source code
test Source code Source code
test.aging Source code
test.births Source code
test.dx Source code
test.fixed.population Source code
test.jheem Man page Source code
test.mortality Source code
test.transitions Source code
test.transmission Source code
test_pull_elem_a Source code
vector.equals Source code
tfojo1/jheem documentation built on Oct. 7, 2022, 1:24 p.m.

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