set.tracked.transition.hiv.positive: Specify an HIV-positive transition to track

In tfojo1/jheem: Executes the JHEEM (Johns Hopkins Epidemiological and Economic Model) - a compartmental model of HIV

Specify an HIV-positive transition to track

Description

Specify an HIV-positive transition to track

Usage

set.tracked.transition.hiv.positive(
  jheem,
  name,
  transition.dimension,
  from = NULL,
  to = NULL,
  keep.dimensions = c("age", "race", "subpopulation", "sex", "risk", "continuum",
    "cd4", "hiv.subset"),
  age = NULL,
  race = NULL,
  subpopulation = NULL,
  sex = NULL,
  risk = NULL,
  continuum = NULL,
  cd4 = NULL,
  hiv.subset = NULL
)

Arguments

jheem	An object of jheem-class
name	The name by which to refer to this tracked transition
transition.dimension	The dimension to which this transition applies
from	The names of the to and from states within the transition dimension that define the transition
to	The names of the to and from states within the transition dimension that define the transition
keep.dimensions	Which dimensions to keep in the tracked array (non-keep dimensions are marginalized out)
age	The subset of the given dimensions for which to track transitions. If null, tracks the transitions across all values of the dimension
race	The subset of the given dimensions for which to track transitions. If null, tracks the transitions across all values of the dimension
subpopulation	The subset of the given dimensions for which to track transitions. If null, tracks the transitions across all values of the dimension
sex	The subset of the given dimensions for which to track transitions. If null, tracks the transitions across all values of the dimension
risk	The subset of the given dimensions for which to track transitions. If null, tracks the transitions across all values of the dimension
continuum	The subset of the given dimensions for which to track transitions. If null, tracks the transitions across all values of the dimension
cd4	The subset of the given dimensions for which to track transitions. If null, tracks the transitions across all values of the dimension
hiv.subset	The subset of the given dimensions for which to track transitions. If null, tracks the transitions across all values of the dimension

tfojo1/jheem documentation built on Oct. 7, 2022, 1:24 p.m.