theboocock/rehh: Searching for footprints of selection using Haplotype Homozygosity based tests

Functions for the detection of footprints of selection on dense SNP data using Extended Homozygosity Haplotype (EHH) based tests. The package includes computation of EHH, iHS (within population) and Rsb (across pairs of populations) statistics. Various plotting functions are also included to facilitate visualization and interpretation of the results.

Getting started

Package details

AuthorMathieu Gautier and Renaud Vitalis
MaintainerMathieu Gautier <[email protected]>
LicenseGPL (>= 2)
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
theboocock/rehh documentation built on May 27, 2017, 5:25 a.m.