bindTree_for_phydynBeast: Merged phylogenetic trees for the 3 HIV-1 subtypes (B, C, and...
In thednainus/senegalHIVmodel: Analysis of HIV data from Senegal
bindTree_for_phydynBeast R Documentation
Merged phylogenetic trees for the 3 HIV-1 subtypes (B, C, and 02_AG)
Description
This is a phylogenetic tree to be used with phydyn in BEAST.
bindTree_CGR_GTR+Gp12+3_droppedTip_phydynBeast.tre
This phylogenetic tree is in the Newick format, and was generated to be used
with phydyn in BEAST2. Tip names is such that allows BEAST to get the age of
the tips and phydyn to get the trait in the model. Trait in our example is
gpm, gpf, msm, and src. For more details see the vignette.
thednainus/senegalHIVmodel documentation built on Oct. 14, 2024, 5:46 a.m.
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| bindTree_for_phydynBeast | R Documentation |
Merged phylogenetic trees for the 3 HIV-1 subtypes (B, C, and 02_AG)
Description
This is a phylogenetic tree to be used with phydyn in BEAST.
bindTree_CGR_GTR+Gp12+3_droppedTip_phydynBeast.tre
This phylogenetic tree is in the Newick format, and was generated to be used with phydyn in BEAST2. Tip names is such that allows BEAST to get the age of the tips and phydyn to get the trait in the model. Trait in our example is gpm, gpf, msm, and src. For more details see the vignette.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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