In tidymass/metid: Metabolite identification based on MS1 and MS2 spectra

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In-house MS2 databases from Michael Snyder lab

1. Michael Snyder HILIC databases

• Professor Michael Snyder's lab. More than 1,000 metabolites.

• Download here

2. Michael Snyder RPLC databases

• Professor Michael Snyder's lab. More than 1,000 metabolites.

• Download here

In-house MS2 databases from Caroline Johnson lab

1. Caroline Johnson HILIC databases

• From Professor Caroline Johnson's lab.

• Download here

2. Caroline Johnson RPLC databases

• From Professor Caroline Johnson's lab.

• Download here

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Public MS2 databases

1. HMDB database

• HMDB database.

• Download here

2. MassBank database

• MassBank database.

• Download here

3. MoNA database

• MoNA database.

• Download here

4. Orbitrap database

• Orbitrap database from MoNA.

• Download here

5. Fiehn HILIC database

• HILIC MS2 database from Fiehn lab.

• Download here

If you need this database, please contact [e-mail].

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Public MS1 databases

1. HMDB MS1 database

• HMDB MS1 database.

• Download here

2. KEGG MS1 database

• KEGG MS1 database.

• Download here

3. Drugbank database

• Drugbank MS1 database.

• Download here

4. T3DB database

• T3DB MS1 database.

• Download here

5. Blood exposome database

• Blood exposome MS1 database.

• Download here

Session information

sessionInfo()

tidymass/metid documentation built on Sept. 4, 2023, 2:01 a.m.