readFastqcZips: Read FastQC

Description Usage Arguments Value Author(s)

Description

Read several zip archives generated by FastQC. Zip archives are decompressed in a temporary directory which is removed afterwards.

Usage

1
readFastqcZips(path = ".", glob = "*_fastqc.zip", verbose = 1)

Arguments

path

character vector of the path to the directory containing the zip archives (will be followed by "*_fastqc.zip")

glob

character vector with wildcard(s) to find zip archives

verbose

verbosity level (0/1/2)

Value

list of lists (one per zip archive)

Author(s)

Timothee Flutre [cre,aut], Nicolas Rode [ctb]


timflutre/rutilsfastqc documentation built on May 31, 2019, 2:16 p.m.