MPcutree: Provides a cut of hclust into k clusters

In tkonopka/MultiPattern: Multi-Pattern Discovery Framework

Description

In contrast to stats::cutree(), this can output more than k clusters. However, the output should contain k clusters that are of nontrivial size. The largest cluster should be labeled as "1", the next biggest as "2" and so on

Usage

MPcutree(tree, k = 2, minsize = 1/(10 * k))

Arguments

tree	tree object output by hclust
k	integer, number of clusters to output
minsize	numeric in range [0, 1], minimal size of the clusters

tkonopka/MultiPattern documentation built on May 31, 2019, 3:45 p.m.