MPgetAverageMetaDistance: Compute a meta distance object from an MP object. Uses...

In tkonopka/MultiPattern: Multi-Pattern Discovery Framework

Description

Settings for subsampling and averaging are determined by MP$settings$subsample.N and MP$settings$subsample.R

Usage

MPgetAverageMetaDistance(MP, standardize = MPrankNeighbors,
  subsample.N = NULL, subsample.R = NULL, alpha = NULL,
  beta = NULL, verbose = TRUE, ...)

Arguments

MP	MultiPattern configuration object
standardize	function used to transform similarity matrices
subsample.N	integer, number of samples in each subsampling; when NULL, value is extracted from MP$settings
subsample.R	integer, number of repetitions; when NULL, value is extracted from MP$settings
alpha	numeric, used as an alternative way to transform similarity matrices, applied after transform.fun; when null, value is extracted from MP$settings
beta	numeric, sets the Lbeta norm; when NULL, value is extracted from MP$settings
verbose	logical, set TRUE to print progress messages
...	additional arguments, used when applying standardize function to the MPS

tkonopka/MultiPattern documentation built on May 31, 2019, 3:45 p.m.