cvFeaturePlot: Plot of feature-wise coefficient of variation values

In tnaake/MatrixQCvis: Shiny-based interactive data-quality exploration for omics data

Plot of feature-wise coefficient of variation values

Description

The function cvFeaturePlot returns a plotly plot of coefficient of variation values. It will create a violin plot and superseded points of coefficient of variation values per list entry of l.

Usage

cvFeaturePlot(l, lines = FALSE)

Arguments

l	list containing matrices
lines	logical

Details

lines = TRUE will connect the points belonging to the same feature with a line. If there are less than two features, the violin plot will not be plotted. The violin plots will be ordered according to the order in l

Value

plotly

Examples

x1 <- matrix(seq_len(100), ncol = 10, nrow = 10, 
    dimnames = list(paste("feature", seq_len(10)), 
        paste("sample", seq_len(10))))
x2 <- x1 + 5
x3 <- x2 + 10
l <- list(x1 = x1, x2 = x2, x3 = x3)
cvFeaturePlot(l, lines = FALSE)

tnaake/MatrixQCvis documentation built on Nov. 4, 2024, 7:42 a.m.