find_qtl_bygene: Given an Ensembl ID, identify all significant QTLs
In tobyjohnson/gtx: Genetics ToolboX
View source: R/find_qtl_bygene.R
Description
This is an utility query to find all the QTLs for a specific gene.
It assumes that all the analyses for which entity_type is not null are QTLs
Usage
1
2
find_qtl_bygene(geneId, cutoff = 2e-05,
dbc = getOption("gtx.dbConnection", NULL))
Arguments
geneId
Gene to search. Recommended to use Ensembl ID. The function will try to infer gene symbols, but result may not be correct.
cutoff
Only return QTLs below this p-value threshold
tobyjohnson/gtx documentation built on Aug. 30, 2019, 8:07 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
View source: R/find_qtl_bygene.R
Description
This is an utility query to find all the QTLs for a specific gene. It assumes that all the analyses for which entity_type is not null are QTLs
Usage
1 2 | find_qtl_bygene(geneId, cutoff = 2e-05,
dbc = getOption("gtx.dbConnection", NULL))
|
Arguments
geneId |
Gene to search. Recommended to use Ensembl ID. The function will try to infer gene symbols, but result may not be correct. |
cutoff |
Only return QTLs below this p-value threshold |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.